Build CAMDAC sample object

Build CAMDAC sample object

CamSample(id, sex, bam = NULL, patient_id = "P")

Arguments

id

Unique identifier for the sample

sex

The sex of the patient, "XX" or "XY". Required for CNA calling.

bam

Sample BAM file. If not given, CAMDAC expects files linked with attach_output.

patient_id

An identifier for the patient