Plot BAF and logR profiles with ggplot

plot_BAF_and_LogR(dt, outfile, downsample = 100000)

Arguments

dt

data.frame with methylation info

outfile

character srting with output pdf filename Saves a pdf w/ methylation rate distribution, biases at polymorphic and non-polymorphic CG/CCGG and coverage distribution

Author

Elizabeth Larose Cadieux